At Illumina, we enjoy seeing how researchers are successfully using our products for a wide range of genetic analysis applications. We are proud to share this list of publications from the growing community of Illumina customers, collaborators, and internal scientists. If we missed one, please send the citation to publications@illumina.com.

Title Authors Source Year
A High Density Integrated Genetic Linkage Map of Soybean and the Development of a 1536 Universal Soy Linkage Panel for Quantitative Trait Locus Mapping Crop Sci. 50 960–968
The need to breed crop varieties suitable for organic farming, using wheat, tomato and broccoli as examples: A review NJAS - Wageningen J. Life Sci.
Molecular targets of epigenetic regulation and effectors of environmental influences. Supratim Choudhuri, Yue Cui, Curtis D Klaassen Toxicol Appl Pharmacol 245 378-93 2010
Genome-wide association study identifies variants at CSF1, OPTN and TNFRSF11A as genetic risk factors for Pagets disease of bone. Omar M E Albagha, Micaela R Visconti, Nerea Alonso, Anne L Langston, Tim Cundy, Rosemary Dargie, Malcolm G Dunlop, William D Fraser, Michael J Hooper, Gianluca Isaia, Geoff C Nicholson, Javier del Pino Montes, Rogelio Gonzalez-Sarmiento, Marco di Stefano, Albert Tenesa, John P Walsh, Stuart H Ralston Nat Genet 42 520-4 2010
Identification of a CpG island methylator phenotype that defines a distinct subgroup of glioma. Cancer Cell 17 510-22 2010
Distinct variants at LIN28B influence growth in height from birth to adulthood. Elisabeth Wid?n, Samuli Ripatti, Diana L Cousminer, Ida Surakka, Tuuli Lappalainen, Marjo-Riitta J?rvelin, Johan G Eriksson, Olli Raitakari, Veikko Salomaa, Ulla Sovio, Anna-Liisa Hartikainen, Anneli Pouta, Mark I McCarthy, Clive Osmond, Eero Kajantie, Terho Lehtim?ki, Jorma Viikari, Mika K?h?nen, Chris Tyler-Smith, Nelson Freimer, Joel N Hirschhorn, Leena Peltonen, Aarno Palotie Am J Hum Genet 86 773-82 2010
Genome-wide association identifies candidate genes that influence the human electroencephalogram. Colin A Hodgkinson, Mary-Anne Enoch, Vibhuti Srivastava, Justine S Cummins-Oman, Cherisse Ferrier, Polina Iarikova, Sriram Sankararaman, Goli Yamini, Qiaoping Yuan, Zhifeng Zhou, Bernard Albaugh, Kenneth V White, Pei-Hong Shen, David Goldman Proc Natl Acad Sci U S A 107 8695-700 2010
Prediction of unobserved single nucleotide polymorphism genotypes of Jersey cattle using reference panels and population-based imputation algorithms. K A Weigel, C P Van Tassell, J R OConnell, P M VanRaden, G R Wiggans J Dairy Sci 93 2229-38 2010
Genome-wide DNA methylation analysis of archival formalin-fixed paraffin-embedded tissue using the Illumina Infinium HumanMethylation27 BeadChip. Christina Thirlwell, Marianne Eymard, Andrew Feber, Andrew Teschendorff, Kerra Pearce, Matthias Lechner, Martin Widschwendter, Stephan Beck Methods 2010
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration. Proc Natl Acad Sci U S A 107 7401-6 2010
Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locus. Nat Genet 42 426-9 2010
On genome-wide association studies for family-based designs: an integrative analysis approach combining ascertained family samples with unselected controls. Jessica Lasky-Su, Sungho Won, Eric Mick, Richard J L Anney, Barbara Franke, Benjamin Neale, Joseph Biederman, Susan L Smalley, Sandra K Loo, Alexandre Todorov, Stephen V Faraone, Scott T Weiss, Christoph Lange Am J Hum Genet 86 573-80 2010
A sequence variant on 17q21 is associated with age at onset and severity of asthma. Eva Halapi, Daniel F Gudbjartsson, Gudrun M Jonsdottir, Unnur S Bjornsdottir, Gudmar Thorleifsson, Hafdis Helgadottir, Carolyn Williams, Gerard H Koppelman, Andrea Heinzmann, H Marike Boezen, Aslaug Jonasdottir, Thorarinn Blondal, Sigurjon A Gudjonsson, Adalbjorg Jonasdottir, Theodora Thorlacius, Amanda P Henry, Janine Altmueller, Marcus Krueger, Hyoung Doo Shin, Soo-Taek Uh, Hyun Sub Cheong, Brynja Jonsdottir, Bjorn R Ludviksson, Dora Ludviksdottir, David Gislason, Choon-Sik Park, Klaus Deichmann, Philip J Thompson, Matthias Wjst, Ian P Hall, Dirkje S Postma, Thorarinn Gislason, Augustine Kong, Ingileif Jonsdottir, Unnur Thorsteinsdottir, Kari Stefansson Eur J Hum Genet 2010
Fine mapping of ZNF804A and genome-wide significant evidence for its involvement in schizophrenia and bipolar disorder. Mol Psychiatry 2010
TMEM132D, a new candidate for anxiety phenotypes: evidence from human and mouse studies. A Erhardt, L Czibere, D Roeske, S Lucae, P G Unschuld, S Ripke, M Specht, M A Kohli, S Kloiber, M Ising, A Heck, H Pfister, P Zimmermann, R Lieb, B P?tz, M Uhr, P Weber, J M Deussing, M Gonik, M Bunck, M S Ke?ler, E Frank, C Hohoff, K Domschke, P Krakowitzky, W Maier, B Bandelow, C Jacob, J Deckert, S Schreiber, J Strohmaier, M N?then, S Cichon, M Rietschel, T Bettecken, M E Keck, R Landgraf, B M?ller-Myhsok, F Holsboer, E B Binder Mol Psychiatry 2010
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