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Description Document Type File Info
ArrayExpress Data Submission Report Plug-in v1.0 for Gene Expression User Guide PDF (<1 MB)
ArrayExpress Data Submission Report Plug-in v2.0.0 for Gene Expression User Guide PDF (<1 MB)
AutoLoader (Dual BeadArray Reader Configuration) Quick Reference Card Quick Reference PDF (<1 MB)
AutoLoader (Single BeadArray Reader Configuration) Quick Reference Card Quick Reference PDF (<1 MB)
AutoLoader User Guide User Guide PDF (2.7 MB)
AutoLoader2 Quick Reference Card Quick Reference PDF (<1 MB)
BeadArray Assays User-Supplied Equipment, Materials, and Reagents Guide Equipment, Materials, and Reagents Checklist PDF (<1 MB)
BeadArray Reader User Guide User Guide PDF (2.7 MB)
BeadStation 500G Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
BeadStation 500G System Manual System Guide PDF (32 MB)
BeadXpress Reader System Facilities Requirements Requirements Document PDF (<1 MB)
BeadXpress Reader System Manual (VeraScan 1.0) System Guide PDF (4 MB)
CASAVA Software Version 1.6 User Guide User Guide PDF (2.41 MB)
CASAVA v1.6 Quick Reference QRB PDF (0.42 MB)
cBot Lab Tracking Form Lab Tracking Form PDF (<1 MB)
cBot User Guide User Guide PDF (<1 MB)
ChIP Sequencing Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
ChIP-Seq Sample Preparation Guide (Japanese) Sample Preparation Guide PDF (<1 MB)
Cluster Station Decontamination Procedure Quick Reference PDF (<1 MB)
Cluster Station Operations Guide Operations Guide PDF (1 MB)
Cluster Station User Guide User Guide PDF (<1 MB)
CNV Region Report Plug-in v2.0.3 User Guide PDF (<1 MB)
cnvPartition Plug-in v2.4.4 for GenomeStudio and KaryoStudio Software User Guide PDF (<1 MB)
DASL Assay Manual Laboratory Process Flow Training Poster PDF (<1 MB)
DASL Assay Single-Use RNA Preparation Experienced User Card Experienced User Card PDF (1.8 MB)
DASL Assay System Guide Assay Guide PDF (27 MB)
DASL Assay System Guide Errata Notice Errata PDF (<1 MB)
DASL Gene Expression Assay for VeraCode Lab Tracking Form Lab Tracking Form PDF (<1 MB)
DASL Gene Expression Assay for VeraCode Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Digital Gene Expression with DpnII Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Digital Gene Expression with DpnII Sample Preparation Guide (Oligo Only Kit) Sample Preparation Guide PDF (<1 MB)
Digital Gene Expression with NlaIII Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Digital Gene Expression with NlaIII Sample Preparation Guide (Oligo Only Kit) Sample Preparation Guide PDF (<1 MB)
Directional mRNA-Seq Library Prep.Pre-Release Protocol Experienced User Card PDF (<1 MB)
DMAP Download Client Utility User Guide User Guide PDF (<1 MB)
FocalAssist User Guide User Guide PDF (<1 MB)
Genome Analyzer IIe Site Preparation Guide Site Prep Guide PDF (<1 MB)
Genome Analyzer IIe User Guide User Guide PDF (4 MB)
Genome Analyzer Operations Guide Operations Guide PDF (4 MB)
Genome Analyzer Safety and Compliance Booklet Safety Booklet PDF (<1 MB)
Genome Analyzer SCS v2.6 Software Guide Software Guide PDF (0.41 MB )
Genome Analyzer Site Prep Guide Site Prep Guide PDF (0.38 MB)
Genome Analyzer User Guide User Guide PDF (1.5 MB)
GenomeStudio 2008.1 Framework User Guide User Guide PDF (4.6 MB)
GenomeStudio ChIP Sequencing Module v1.0 User Guide User Guide PDF (1.9 MB)
GenomeStudio DNA Sequencing Module v1.0 User Guide User Guide PDF (1.7 MB)
GenomeStudio Gene Expression Module v1.0 User Guide User Guide PDF (3.9 MB)
GenomeStudio Genotyping Module v1.0 User Guide User Guide PDF (3.3 MB)
GenomeStudio GT Workflow for the GoldenGate Indexing Assay User Guide PDF (<1 MB)
GenomeStudio Methylation Module v1.0 User Guide User Guide PDF (3.7 MB)
GenomeStudio Protein Analysis Module v1.0 User Guide User Guide PDF (1.6 MB)
GenomeStudio RNA Sequencing Module v1.0 User Guide User Guide PDF (2.0 MB)
GenomeStudio Software 2008.1 Release Notes Release Notes PDF (<1 MB)
GenomeStudio Software 2009.1 Release Notes Release Notes PDF (<1 MB)
GenomeStudio Software 2009.2 Release Notes Release Notes PDF (<1 MB)
GenomeStudio Software 2010.1 Release Notes Release Notes PDF (<1 MB)
Genomic DNA Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Genomic DNA Sample Preparation Guide (Japanese) Sample Preparation Guide PDF (<1 MB)
Genomic DNA Sample Preparation Guide (Oligo Only Kit) Sample Preparation Guide PDF (<1 MB)
GEO Data Submission Report Plug-in v2.0.0 for the GenomeStudio Gene Expression Module User Guide PDF (<1 MB)
GGGT Import Manual Batch DNA Template PDF (<1 MB)
GGGT Import Manual Batch DNA noOPA Template PDF (<1 MB)
GGGT Import Manual Batch MUN Template PDF (<1 MB)
GGGT Import Manual Batch SUD Template PDF (<1 MB)
GoldenGate Automation DASL Assay for BeadStation Addendum Addendum PDF (5.6 MB)
GoldenGate Automation DASL Assay Laboratory Process Flow Training Poster PDF (<1 MB)
GoldenGate Automation, DASL Assay Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Automation, DASL Assay Production Tracking Worksheet Lab Tracking Form PDF (<1 MB)
GoldenGate Genotyping Assay for VeraCode Automated Protocol Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Genotyping Assay for VeraCode Lab Tracking Form Lab Tracking Form PDF (<1 MB)
GoldenGate Genotyping Assay for VeraCode Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Genotyping Assay Guide Assay Guide PDF (8.3 MB)
GoldenGate Genotyping Assay Sample Sheet Template Template PDF (<1 MB)
GoldenGate Genotyping Assay, Automated Experienced User Card (Universal Array Matrix) Experienced User Card PDF (<1 MB)
GoldenGate Genotyping Assay, Automated Experienced User Card (Universal BeadChip) Experienced User Card PDF (<1 MB)
GoldenGate Genotyping Assay, Lab Tracking Form (Universal Array Matrix) Lab Tracking Form PDF (<1 MB)
GoldenGate Genotyping Assay, Lab Tracking Form (Universal BeadChip) Lab Tracking Form PDF (1.4 MB)
GoldenGate Genotyping Assay, Manual Experienced User Card (Universal Array Matrix) Experienced User Card PDF (<1 MB)
GoldenGate Genotyping Assay, Manual Experienced User Card (Universal BeadChip) Experienced User Card PDF (<1 MB)
GoldenGate Genotyping for BeadLab Automated Protocol Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Genotyping for BeadLab Lab Tracking Form Lab Tracking Form PDF (<1 MB)
GoldenGate Methylation Assay for VeraCode Lab Tracking Form Lab Tracking Form PDF (<1 MB)
GoldenGate Methylation Assay for VeraCode Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Methylation Assay Guide Assay Guide PDF (3 MB)
GoldenGate Methylation Assay Lab Tracking Worksheet Lab Tracking Form PDF (<1 MB)
GoldenGate Methylation Assay, Multi-Use, Automated Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Methylation Assay, Multi-Use, Manual Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Methylation Assay, Single-Use, Automated Experienced User Card Experienced User Card PDF (<1 MB)
GoldenGate Methylation Assay, Single-Use, Manual Experienced User Card Experienced User Card PDF (<1 MB)
GX Custom Output Report Plug-in v2.1.0 for the GenomeStudio Gene Expression Module User Guide PDF (<1 MB)
Haploview Input Report Plug-in v2.0.0 for the GenomeStudio Genotyping Module User Guide PDF (<1 MB)
Hybridization Oven System Guide System Guide PDF (<1 MB)
iControlDB Download Client User Guide User Guide PDF (1 MB)
iControlDB Upload User Guide User Guide PDF (1 MB)
Illumina BeadLab System Guide System Guide PDF (8 MB)
Illumina GTS LIMS User Guide User Guide PDF (7.3 MB)
Illumina LIMS Project Manager Guide Project Manager Guide PDF (5 MB)
Illumina LIMS User Guide User Guide PDF (2.5 MB)
Important Customer Information about the 12-sample Universal BeadChip (DASL Gene Expression Assay) Product Insert PDF (<1 MB)
Important Customer Information about the 12-sample Universal BeadChip (GoldenGate Methylation Assay) Product Insert PDF (<1 MB)
Important Customer Information about the 12-sample Universal BeadChip (MicroRNA Expression Profiling Assay) Product Insert PDF (<1 MB)
Infinium Assay Best Practices User Guide PDF (2 MB)
Infinium Assay Glass Cleaning Protocol Quick Reference PDF (<1MB)
Infinium Assay Lab Setup and Procedures User Guide PDF (2 MB)
Infinium HD Assay Gemini Lab Tracking Worksheet Lab Tracking Form PDF (<1 MB)
Infinium HD Assay Gemini Protocol Guide Assay Guide PDF (6 MB)
Infinium HD Assay Gemini, Automated Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Infinium HD Assay Gemini, Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Infinium HD Assay Super Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Infinium HD Assay Super Protocol Guide Assay Guide PDF (7.5 MB)
Infinium HD Assay Super Sample Sheet Template Template PDF (<1 MB)
Infinium HD Assay Super Sample Sheet Template (HumanOmni1-Quad BeadChip only) Template CSV (<1 MB)
Infinium HD Assay Super, Automated Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Infinium HD Assay Super, Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Infinium HD Assay Ultra Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Infinium HD Assay Ultra Protocol Guide Assay Guide PDF (8 MB)
Infinium HD Assay Ultra, Automated Experienced User Card Experienced User Card PDF (<1 MB)
Infinium HD Assay Ultra, Manual Experienced User Card Experienced User Card PDF (<1 MB)
Infinium II Assay HC Two-Sample, Automated Experienced User Card Experienced User Card PDF (<1 MB)
Infinium II Assay HC Two-Sample, Manual Experienced User Card Experienced User Card PDF (<1 MB)
Infinium II Assay Multi-Sample Lab Tracking Worksheet Lab Tracking Form PDF (<1 MB)
Infinium II Assay Multi-Sample Protocols Assay Guide PDF (4.4 MB)
Infinium II Assay Multi-Sample, Automated Experienced User Card Experienced User Card PDF (<1 MB)
Infinium II Assay Multi-Sample, Manual Experienced User Card Experienced User Card PDF (<1 MB)
Infinium II Assay Two-Sample HC Protocols Assay Guide PDF (5.7 MB)
Infinium II Assay Two-Sample Lab Tracking Worksheet Lab Tracking Form PDF (<1 MB)
Infinium LIMS Project Manager Guide Project Manager Guide PDF (5 MB)
Infinium LIMS User Guide User Guide PDF (5 MB)
Infinium Methylation Assay Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Infinium Methylation Assay Protocol Guide Assay Guide PDF (9 MB)
Infinium Methylation Assay Sample Sheet Template Template PDF (<1 MB)
Infinium Methylation Assay, Automated Protocol Experienced User Card Experienced User Card PDF (<1 MB)
Infinium Methylation Assay, Manual Protocol Experienced User Card Experienced User Card PDF (<1 MB)
iScan and AutoLoader2 System Guide System Guide PDF (3 MB)
iScan System Quick Reference Card Quick Reference PDF (<1 MB)
KaryoStudio Software v1.2 Release Notes Release Notes PDF (<1 MB)
KaryoStudio Software v1.2 User Guide User Guide PDF (6 MB)
Make MUN ASE Batch Template PDF (<1 MB)
Make SUD ASE Batch Template PDF (<1 MB)
Make SUD Batch Template PDF (<1 MB)
Mate Pair Library v2 Sample Preparation Guide For 2-5 kb Libraries Sample Preparation Guide PDF (<1MB)
Mate Pair Library v2 Sample Preparation Guide For 2–5 kb Libraries (Japanese) Sample Preparation Guide PDF (<1 MB)
Merlin Input Report Plug-in v2.0.1 for GenomeStudio Software User Guide PDF (<1 MB)
Methylation Custom Output Report Plug-in v2.0.0 for the GenomeStudio Methylation Module User Guide PDF (<1 MB)
MicroRNA Expression Profiling Assay for BeadChips Experienced User Card Experienced User Card PDF (<1 MB)
MicroRNA Expression Profiling Assay for BeadChips Lab Tracking Form Lab Tracking Form PDF (<1 MB)
MicroRNA Expression Profiling Assay for SAMS Experienced User Card Experienced User Card PDF (<1 MB)
MicroRNA Expression Profiling Assay for SAMs Lab Tracking Form Lab Tracking Form PDF (<1 MB)
MicroRNA Expression Profiling Assay Guide Assay Guide PDF (4.4 MB)
mRNA Sequencing Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
mRNA-Seq Sample Preparation Guide (Japanese) Sample Preparation Guide PDF (<1 MB)
Multiplexed Paired-End Sequencing Experienced User Card Experienced User Card PDF (<1 MB)
Multiplexed Sequencing on the Genome Analyzer (v1) Reagent Preparation Guide PDF (<1 MB)
Multiplexed Sequencing Primers and PhiX Control Kit v2 Reagent Preparation Guide Reagent Preparation Guide PDF (<1 MB)
Multiplexed Single-Read Sequencing Experienced User Card Experienced User Card PDF (<1 MB)
Multiplexing Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Off-Line Basecaller v1.6 User Guide User Guide PDF (1 MB)
Paired-End Cluster Generation Experienced User Card Experienced User Card PDF (<1 MB)
Paired-End Cluster Generation Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Paired-End Sequencing Experienced User Card Experienced User Card PDF (<1MB)
Paired-End Sequencing Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Paired-End Sequencing Sample Preparation Guide (English) Sample Preparation Guide PDF (<1 MB)
Paired-End Sequencing Sample Preparation Guide (Japanese) Sample Preparation Guide PDF (<1 MB)
Pipeline v1.4 and CASAVA v1.0 Quick Reference Booklet Quick Reference PDF (<1 MB)
Pipeline v1.4 and CASAVA v1.0 Software User Guide User Guide PDF (2 MB)
Pipeline v1.5 and CASAVA v1.0 Quick Reference Booklet Quick Reference PDF (<1 MB)
Pipeline v1.5 and CASAVA v1.0 Software User Guide User Guide PDF (<1 MB)
Pipeline Visual Controller and Curator Installation Guide Installation Guide PDF (<1 MB)
Pipeline Visual Controller User Guide User Guide PDF (1.6 MB)
PLINK Input Report Plug-in v2.1 for GenomeStudio Software User Guide PDF (<1 MB)
qPCR Quantification Protocol Guide Sample Preparation Guide PDF (<1 MB)
Sequencing Documentation Suite Quick Reference Card Quick Reference Card PDF (1 MB)
Sequencing Kit v4 Reagent Preparation Guide Reagent Preparation Guide PDF (<1 MB)
Single-Read Cluster Generation Experienced User Card Experienced User Card PDF (<1 MB)
Single-Read Cluster Generation Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Single-Read Sequencing Experienced User Card Experienced User Card PDF (<1MB)
Single-Read Sequencing Lab Tracking Form Lab Tracking Form PDF (<1MB)
Small RNA Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Small RNA Sample Preparation Guide (Oligo Only Kit) Sample Preparation Guide PDF (<1 MB)
Small RNA v1.5 Sample Preparation Guide Sample Preparation Guide PDF (<1 MB)
Thermocycler Control Software User Guide User Guide PDF (<1 MB)
Universal CNV Adapter Plug-in v2.1.0 for GenomeStudio Software User Guide ZIP (<1 MB)
Universal-12 BeadChip Booklet Addendum PDF (<1 MB)
Universal-12 BeadChip Booklet Addendum PDF (<1 MB)
Universal-12 BeadChip Booklet Addendum PDF (<1 MB)
Universal-12 BeadChip Booklet Addendum PDF (<1 MB)
Using eQTL Demo Data Quick Reference PDF (<1 MB)
Using Pipeline Output Data for ChIP Sequencing Analysis User Guide PDF (<1 MB)
Using Pipeline Output Data for Whole Genome Alignment User Guide PDF (<1 MB)
Using SBS Sequencing Kit v2 on the Genome Analyzer Reagent Preparation Guide PDF (<1 MB)
Using SBS Sequencing Kit v3 on the Genome Analyzer Reagent Preparation Guide PDF (<1 MB)
Using Sequencing Control Software v2.4 User Guide PDF (<1 MB)
Using Sequencing Control Software v2.5 Quick Reference PDF (<1 MB)
Using the Paired-End Cluster Generation Kit v2 on the Cluster Station and Paired-End Module Reagent Preparation Guide PDF (<1 MB)
Using the Single-Read Cluster Generation Kit v2 on the Cluster Station Reagent Preparation Guide PDF (<1 MB)
VeraCode and BeadXpress Equipment, Materials, and Reagents Checklist Equipment, Materials, and Reagents Checklist PDF (<1 MB)
VeraCode Assay Guide Assay Guide PDF (14 MB)
VeraCode Bead Kitting System User Guide User Guide PDF (<1 MB)
VeraCode Sample Sheet Template PDF (<1 MB)
VeraCode Vortex Incubator User Guide User Guide PDF (3 MB)
WG DASL Assay Sample Sheet Template Template PDF (<1 MB)
WGGT Import Manual Batch Template PDF (<1 MB)
Whole-Genome Gene Expression DASL Assay Experienced User Card Experienced User Card PDF (<1 MB)
Whole-Genome Gene Expression DASL Assay Guide Assay Guide PDF (4 MB)
Whole-Genome Gene Expression DASL Assay Lab Tracking Form Lab Tracking Form PDF (<1 MB)
Whole-Genome Gene Expression Direct Hybridization Assay Experienced User Card Experienced User Card PDF (<1 MB)
Whole-Genome Gene Expression Direct Hybridization Assay Guide Assay Guide PDF (1.6 MB)