A sequencer for every need. Every Budget. Every lab.

From the power of the HiSeq 2500 to the speed of MiSeq, Illumina has the sequencer that’s just right for you.
 

HiSeq 2500/2000


HiSeq 1500/1000


HiSeq 2500


HiSeq 1500


HiScan SQ


MiSeq
Mode High Output High Output Rapid Run Rapid Run
Output (maximum) 600Gb 300Gb 180Gb 90Gb 150Gb 8.5Gb
Run Time 2 - 11 Days 2 - 8.5 Days 7 - 40 Hr. 7 - 40 Hr. 1.5 - 8.5 Days 4 - 39 Hr.
Paired-end Reads (maximum) 6 Billion 3 Billion 1.2 Billion 600 Million 1.5 Billion 15 Million
Single-end Read (maximum) 3 Billion 1.5 Billion 600 Million 300 Million 750 Million 7.5 Million
Max Read Length 2x100 bp 2x100 bp 2x150 bp 2x150 bp 2x100 bp 2x250 bp
Bases above Q30 (2x100bp) >80% (2x100 bp) >80% (2x100 bp) >80% (2x100 bp) >80% (2x100 bp) >80% (2x100 bp) >85% (2x100 bp)
Required Input 50 ng with Nextera
100 ng – 1 µg with TruSeq
50 ng with Nextera
100 ng – 1 µg with TruSeq
50 ng with Nextera
100 ng – 1 µg with TruSeq
50 ng with Nextera
100 ng – 1 µg with TruSeq
50 ng with Nextera
100 ng – 1 µg with TruSeq
1ng with NexteraXT
50 ng with Nextera
100 ng – 1 µg with TruSeq