HiSeq Control and Real-Time Analysis Software
Load-and-Go Sequencing
The HiSeq System features an exceptional user interface and load-and-go workflows. It integrates cluster generation and sequencing into a single instrument, generating base calls and quality metrics in real time.
Generate Real-Time Base Calls and Quality Metrics with Ease
The software installed on the HiSeq System features easy-to-use, workflow-oriented, touchscreen operation to guide you through the experimental set-up. The software controls the flow cell stage, fluidics system, and flow cell temperatures, and captures images of clusters. It generates image analysis, base calling, and base call quality automatically.
The HiSeq 2500 System has been obsolesced. We intend to continue to provide full support of the instrument and supply the reagents through February 28th, 2023. We also offer several instruments that support the same applications as the HiSeq 2500 System; we recommend using the Sequencing Platform Comparison Tool to find the best instrument for your needs.
Sequencing Analysis Viewer
Monitor Sequencing Runs from Any Location
Sequencing Analysis Viewer Software (SAV) enables researchers to analyze quality statistics from one or multiple runs in real time, on the sequencing system or on any Windows-based PC.
Reducing the Whole-Genome Data Storage Footprint
See how data quality score resolution can be reduced without sacrificing score accuracy or variant calling performance.
Read White PaperAccess Software and Support Resources
HiSeq Control Software Updates
Custom Protocol Selector
Generate custom protocols tailored to your Illumina sequencer and experimental workflow.
Create Custom Protocols
