BaseSpace Sequence Hub is the Illumina cloud-based genomics computing environment for next-generation sequencing (NGS) data management and analysis. Sequencing labs can securely store and share sequencing data, and researchers can simplify and accelerate NGS data analysis with push-button tools. Labs can also set-up and monitor their sequencing runs in real time on any Illumina instrument. BaseSpace Hub can be accessed via an intuitive web-based interface or Linux-based command line tool. For customers who need a local solution, we offer BaseSpace Onsite Sequence Hub.
BaseSpace Sequence Hub subscription tiers enable labs of all sizes to achieve maximum efficiency with tight instrument integration and simplified collaboration. We have three tiers of offerings.
|Storage||1 TB Limit||Expandable||Expandable|
|Analysis||250 iCredit Limit*||Expandable*||Expandable*|
|Bioinformatics Professional Services Support||
|Private Domain and Single Sign-on|
|PHI Security/Privacy Compliance|
|Access Control & Audit Trail|
|Price||Free||Contact a Sales Rep||Contact a Sales Rep|
* iCredits will be made available upon launch of compute billing.
For Research Use Only. Not for use in diagnostic procedures.
BaseSpace Sequence Hub is the only bioinformatics platform with both cloud and onsite options that is directly connected to all Illumina instruments*.
Stream sequencing runs and store data immediately.
With BaseSpace Hub there is no need to set-up and maintain IT infrastructure to store and analyze your genomics data.
We offer scientific and technical consulting through our Bioinformatics Professional Services offering to help guide you through bioinformatics workflows. Bioinformatics Professional Services offers group and one-on-one sessions on topics including introduction to bioinformatics, how to use various BaseSpace Hub features to maximize productivity, in-depth discussions on specific NGS workflows, and assistance creating custom pipelines into BaseSpace Hub.
*HiSeqX does not connect to BaseSpace Onsite Sequence Hub
In addition to NGS data analysis, sample/run management, and cloud bioinformatics or onsite options, key features of BaseSpace Sequence Hub include:
BaseSpace Hub offers a wide variety of NGS data analysis apps, including:
In addition, BaseSpace Hub enables users to develop custom bioinformatics pipelines in BaseSpace Hub. App developers are able to keep apps private, share with collaborators, or submit for publication to the BaseSpace App store.
Together, these apps cover the common data analysis methods used with Illumina sequencing data. These methods include RNA-Seq, exome /enrichment, amplicon, whole-genome sequencing (WGS), de novo assembly, and 16S metagenomics.
BaseSpace Onsite Sequence Hub is a local version of the BaseSpace Hub cloud bioinformatics solution that enables you to safely and securely store, share, and analyze NGS data from MiniSeq, MiSeq, MiSeqDx (in RUO mode), NextSeq 500, NextSeq 550, HiSeq 2500, HiSeq 3000, and HiSeq 4000 systems.
BaseSpace Hub Data Sheet View PDF Learn more about BaseSpace Hub highlights, tools, and applications.
Get Started with BaseSpace Hub View Video Learn how to get started with push-button bioinformatics in BaseSpace Hub.
BaseSpace Onsite Hub View Video BaseSpace Onsite Sequence Hub allows users to access their next-generation sequencing data anywhere.
BaseSpace Apps Quick Guide View PDF
BaseSpace Hub Support Find user guides, app release notes, and additional technical information. Access BaseSpace Hub Support
Streamlined NGS Data with BaseSpace Hub Read Interview BaseSpace integrated workflow helps BRC-Seq core lab deliver high-quality sequencing data to its customers.
BaseSpace Sequence Hub is intended for research applications and not for any diagnostic or clinical use. It is intended to be used with Illumina research products only.