Explore sequencing data sets for a variety
of applications

Sequencing Data Library

View sequencing data generated on Illumina sequencers and analyzed in BaseSpace, the Illumina genomics computing environment. See how BaseSpace makes it easy to analyze your sequencing data and generate meaningful reports. View sample data sets and reports for a variety of applications, or test BaseSpace Apps on the sample data, and evaluate the results interactively.

* Note that access to this data requires a BaseSpace login.

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BaseSpace Sequencing Data Sets

Data Set
MiSeq B.cereus demo data
Species Instrument Application Link Type Links
Bacillus cereus MiSeq Resequencing Run Bacillus cereus data
Bacillus cereus MiSeq Resequencing Project BaseSpace demo data
Data Set
MiSeq: PhiX Genome 2 x 151 bp
Species Instrument Application Link Type Links
PhiX MiSeq Resequencing Project Resequencing PhiX Run Data
PhiX MiSeq Resequencing Run 2 x 151 bp PhiX Data (1.72 GB)
Data Set
HiSeq 2500 2 x 150 bp Whole Human Genome Demo
Species Instrument Application Link Type Links
Homo sapiens HiSeq 2500 Resequencing Run 2 x 150 bp HiSeq 2500 NA12878 demo data
Homo sapiens HiSeq 2500 Resequencing Run 2 x 150 bp HiSeq 2500 NA12878 demo data
Homo sapiens HiSeq 2500 Resequencing Project HiSeq 2500 2 x 150 bp NA12878 demo data
Data Set
Nextera Rapid Capture Exome Kit Data Sets
Species Instrument Application Link Type Links
  HiSeq 2500 Targeted Sequencing; Exome Sequencing Run Nextera Rapid Capture Exome HiSeq 2500 data
Homo sapiens HiSeq 2500 Targeted Sequencing; Exome Sequencing Run Nextera Rapid Capture Expanded Exome HiSeq 2500 data
Homo sapiens MiSeq Targeted Sequencing; Exome Sequencing Run Nextera Rapid Capture Exome MiSeq NA18507 data
Data Set
MiSeq Cancer Demo
Species Instrument Application Link Type Links
Homo sapiens MiSeq Targeted Sequencing; Cancer Research Run Cancer Demo Data (2.44 GB)
Homo sapiens MiSeq Targeted Sequencing; Cancer Research Project Cancer Sequencing Demo Data
Data Set
HiSeq 2500: TruSeq Stranded mRNA LT Kit (SEQC Brain and Reference)
Species Instrument Application Link Type Links
Homo sapiens HiSeq 2500 RNA-Seq Project HiSeq 2500: TruSeq Stranded mRNA LT (SEQC: Brain & UHRR) Data
Data Set
16S Metagenomics Illumina Library Prep Protocol Sample Data
Species Instrument Application Link Type Links
Various MiSeq Metagenomics; Microbial Research Run 16S Metagenomics Library Prep Data (15.42 GB)
Data Set
TruSight One Sequencing Panel MiSeq Family Trio Data
Species Instrument Application Link Type Links
Homo sapiens MiSeq Targeted Sequencing Run TruSight One Sequencing Panel Data (11.52 GB)
Homo sapiens MiSeq Targeted Sequencing Project TruSight One Sequencing Panel Data
Data Set
MiSeq v3 Reagents: TruSight Myeloid Kit
Species Instrument Application Link Type Links
Homo sapiens MiSeq Targeted Sequencing; Cancer Research Project MiSeq v3: TruSight Myeloid (Coriell & HorizonDx, Pool 1) Data
Data Set
HiSeq 2500: TruSeq Synthetic Long-Read Kit & Long-Read Assembly App
Species Instrument Application Link Type Links
Toxoplasma gondii HiSeq 2500 De Novo Assembly Project HiSeq 2500: TruSeq Synthetic Long-Read Kit - T. gondii data
Data Set
HiSeq 2000: TruSeq Stranded Total RNA Kit (MAQC Brain and Reference)
Species Instrument Application Link Type Links
Homo sapiens HiSeq 2000 RNA-Seq; Differential Expression Run HiSeq 2000: TruSeq Stranded Total RNA (MAQC) Data (217.16 GB)
Homo sapiens HiSeq 2000 RNA-Seq; Differential Expression Project HiSeq 2000: TruSeq Stranded Total RNA (MAQC) Data
Data Set
NextSeq 500: RNA-Seq (8-plex)
Species Instrument Application Link Type Links
Homo sapiens NextSeq 500 RNA-Seq Project NextSeq 500: RNA-Seq (8-plex) Data
Data Set
NextSeq 500: TruSight One Panel (CEPH Trio replicates)
Species Instrument Application Link Type Links
Homo sapiens NextSeq 500 Targeted Sequencing Run NextSeq 500: TruSight One (CEPH Trio replicates) Data (44.63GB)
Homo sapiens NextSeq 500 Targeted Sequencing Project NextSeq 500: TruSight One Data (CEPH Trio replicates)