BaseSpace Sequence Hub

Simplify your bioinformatics with an economical and powerful computing environment to manage, analyze, and share data. Read More...
Select Product(s)

BaseSpace Professional Annual Subscription



BaseSpace Enterprise Annual Subscription (15066411)


BaseSpace Live Storage (1TB) (15066407)



BaseSpace Live Storage (5TB) (15066408)



BaseSpace Live Storage (10TB) (15066409)



BaseSpace Live Storage (50TB) (15066410)


Accessory Products

BaseSpace Sequence Hub Consumption Billing (20012931)


As a key component of the BaseSpace Suite, BaseSpace Sequence Hub is a direct extension of your Illumina instruments. Data flows directly from the instrument into BaseSpace Sequence Hub, which enables you to manage and analyze data using a curated set of analysis apps. BaseSpace Sequence Hub:

  • Enables you to set up and monitor instrument runs in real-time
  • Promotes efficiency by converting sequencing data to a standard format and directly streaming them to the cloud
  • Provides a more economical solution than assembling infrastructures and tools in-house
  • Increases productivity with easy access and execution of a multitude of genomic analysis apps (provided by you, Illumina, or third-parties). As a result, specialized staff members, such as bioinformaticians are free to work on more complicated analyses
  • Fosters collaboration and innovation with simplified data sharing
  • Provides multiple layers of security and supports Health Insurance Portability and Accountability Act (HIPAA) compliance using robust Amazon Web Services cloud infrastructure
  • Scales to accommodate the need for more storage and computing with a tiered pricing structure

BaseSpace Sequence Hub Blog

BaseSpace Sequence Hub Registration

Register now for a BaseSpace Sequence Hub Basic Account, which includes 1 TB of Storage.

Register Now

Already have an account? Log in.

Integrated Run Setup and Monitoring

Integration with all Illumina instruments means that users can set up runs and monitor them from anywhere.

Streamlined data management and storage

Scale up or down depending upon your storage needs - all without burdening your IT department with hardware maintenance.

Simplified Data Analysis

Easily perform routine data analysis with a comprehensive library of apps available.





Storage Up to 1 TB* 1 TB plus pay as you go 1 TB plus pay as you go
Compute 30 Day Free Trial of 250 complimentary Credits 250 complimentary iCredits plus pay as you go 250 complimentary iCredits plus pay as you go
Premier Data Security and Privacy
Run Setup
Unlimited Monitoring
Unlimited Sharing §
Apps Free apps only (after trial period expires) All All
Comprehensive Security Framework
Multi-user Access
Bioinformatics Professional Services Support   **
8 hours

24 hours
Multiple Workgroups    
Private Domain and Single Sign-on    
Supports customers in a HIPAA-regulated environment    
Access Control and Audit    
Price Free Contact a Sales Rep Contact a Sales Rep

* Customers wanting to purchase additional storage must upgrade to a Professional or Enterprise account.

† Customers wanting additional iCredits must upgrade to a Professional or Enterprise account.

‡ iCredits will be applied to users account upon launch of Compute Billing.

§ Unlimited sharing and transfer apply only to Basic accounts under the 1 Tb storage quota.

** Professional services are not included with the academic plans.

Customer Stories

BRC-Seq Customers Benefit from Streamlined BaseSpace Integrated Workflow

BaseSpace enables tracking of samples, from library prep to data analysis, helping BRC-Seq deliver high-quality sequencing data and additional value to its customers.

Read More

See the Product


Related Products

Image Source
BaseSpace Clarity LIMS

BaseSpace Clarity LIMS is a laboratory information management system that helps laboratories track samples and optimize procedures and workflows.

Image Source
BaseSpace Variant Interpreter (Beta)

BaseSpace Variant Interpreter (Beta) enables genetic testing labs to rapidly annotate, filter, and interpret genomic data.

Image Source
BaseSpace Cohort Analyzer

BaseSpace Cohort Analyzer allows you to integrate and analyze subject and genomic data together using innovative visualization and analysis tools.

Image Source
BaseSpace Correlation Engine

BaseSpace Correlation Engine mines over 20,000 genomic studies to get data-driven answers for genes, experiments, drugs and phenotypes for your research.