Sequencing Data Analysis Solutions
Sequencing generates large volumes of data, and the analysis required can be intimidating. Fortunately, the analytical tools available today take most of the manual work out of the next-generation sequencing (NGS) data analysis process, making it easier for you to glean meaningful information quickly.
User-friendly Illumina tools smooth the process of analyzing sequencing data, so you can spend more time doing research and less time configuring workflows. Our sequencing data analysis software packages perform analysis after the on-instrument data processing is complete and offer optimal time to answer.
Sequencing Data Analysis Process
The NGS data analysis process includes three main steps: primary, secondary, and tertiary data analysis. Some steps are performed automatically on the sequencing instrument, while other steps occur after sequencing is completed.
Primary Data Analysis
Real-Time Analysis (RTA) software operates during cycles of sequencing chemistry and imaging, providing base calls and associated quality scores representing the primary structure of DNA or RNA strands. This built-in software performs primary data analysis on Illumina sequencing systems automatically.
Secondary Data Analysis
Alignment and assembly of DNA or RNA fragments provides the full sequence for a sample, from which genetic variants can be determined.
DNA Sequencing Data Analysis
We offer intuitive tools to simplify DNA sequence alignment, variant calling, and data visualization, and provide ultra-rapid secondary analysis.
RNA Sequencing Data Analysis
Our user-friendly analysis tools simplify data analysis for a broad range of RNA sequencing experiments, from gene fusion detection to total RNA expression profiling.
Tertiary Data Analysis
From sequence data, you can use biological data mining and interpretation tools to convert data into knowledge.
Biological Data Interpretation
Interpreting genetic variation leads to knowledge and insights into basic biology, and the causes of diseases and how to treat or prevent them.
Coronavirus Data Analysis and Workflow Management
Explore software tools designed to accelerate coronavirus detection and identification, simplify workflow management, and help scientists contribute to public databases, free of charge.
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Ultra-Rapid NGS Data Analysis
The Illumina DRAGEN (Dynamic Read Analysis for GENomics) Bio-IT Platform provides fast, robust secondary analysis of next-generation sequencing (NGS) data. The platform analyzes sequencing data from a variety of experiment types, including whole genomes, whole exomes, germline and somatic datasets, and RNA sequencing experiments.
Sequencing Data Analysis Articles
Bringing Bioinformatics Pipeline In-House Reduces Costs and Decreases Turnaround Time
Phosphorus uses the DRAGEN Bio-IT Platform to perform genomics data analysis onsite and at an accessible price point.
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Streamlining NGS Data Analysis and Storage
An Oxford scientist discusses her decision to move NGS data analysis to the cloud and the benefits it has given her lab, including increased productivity and cost-effectiveness.
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Collaborative Environment Released for COVID-19 Host Response Research
The resource enables hypothesis validation around important pathways, biomarkers, and potential drug candidate leads.
Read ArticleData Analysis Tips for New Users
Sequence File Formats
Sequencing data can be represented with a variety of file formats, many of which are interchangeable, and your informatics system needs to be able to handle the formats you’ll use.
Learn MoreSequencing Data Examples
Explore sample data generated on Illumina sequencing systems. These examples help you understand sequencing data and analysis reports.
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Additional Resources
Software Support
Access resources and support for Illumina software, including sequencing data analysis and other software tools.
Online Training
These free online courses cover common topics in library prep, sequencing, and data analysis.
Illumina DRAGEN Bio-IT Platform Training
Learn more about the accurate, ultra-rapid secondary analysis platform and accompanying pipelines.
Secure and Compliant: BaseSpace Sequence Hub on AWS
Build your genomic sequencing practice with this powerful, easy-to-use bioinformatics compute and storage environment.