Microarray software tools to ensure optimal time-to-answer

Microarray Data Analysis and Experimental Design

Our microarray software offerings include tools that facilitate analysis of microarray data, and enable array experimental design and sample tracking. These solutions ensure optimal time-to-answer, so you can spend more time doing research, and less time designing probes, managing samples, and configuring complex microarray data analysis workflows.

Overview of Microarray Software

Easily convert microarray data into meaningful results with these analysis tools:

GenomeStudio Software
GenomeStudio Software enables you to visualize and analyze microarray data generated on Illumina platforms. The software package is composed of discrete application modules that enable you to obtain a comprehensive view of the genome, gene expression, and gene regulation.

View GenomeStudio Software


Beeline Software
Beeline Software offers a direct path to reduce experimental microarray data size and facilitate data analysis for large experiments. As the size of array data sets increases, the time required to calculate sample statistics and visually interrogate clusters has become prohibitive. Beeline software addresses this bottleneck by enabling pre-filtering of large data sets prior to import into GenomeStudio.

View Beeline Software

DesignStudio is an online software tool for designing custom Illumina genotyping array probes. Design content for Illumina genotyping microarray experiments. Create assays tailored directly to specific needs for applications such as targeted region genotyping and fine mapping.

Learn More About Array Probe Design

The Illumina Laboratory Information Management System (LIMS) provides positive array sample tracking and component verification. It also enables project and data management, lab workflow management, and reporting for Illumina genotyping array experiments.

View Array LIMS
Interested in receiving newsletters, case studies, and information on genomic analysis techniques? Enter your email address.
How to Analyze Microarray Data
How to Analyze Microarray Data

Access online training to learn how to analyze data with Illumina microarray software.

View Array Training
Microarray Software Support
Microarray Software Support

Access array software user guides, downloads, and other technical information.

Find Array Software Support
Optimizing Genotyping Microarray Data Analysis
Optimizing Genotyping Microarray Data Analysis

Find out how to analyze genotyping array data more efficiently.

Read Technical Note
Expression Array Data QC
Expression Array Data QC

Learn how to ascertain gene expression microarray data quality and identify outlier samples.

Read Technical Note