Local Run Manager for intuitive data analysis

Local Run Manager Software

Automatic Data Analysis

Local Run Manager (LRM) software is an integrated solution designed to create sequencing runs, monitor run status, analyze sequencing data, and view results. LRM software integrates with the instrument control software and can be directly accessed on the MiniSeq and iSeq 100 platforms through a web browser. An off-instrument version of the same easy-to-use LRM software is available and compatible with the iSeq System, the MiniSeq System, the MiSeq Series, and the NextSeq Series.

Various optional software modules are available to perform analysis procedures designed for different library types. The LRM software currently works with the analysis software modules listed below.

Find Compatible Library Prep Kits

Most Local Run Manager analysis modules will prompt you to select a library prep kit for a given run. Find out which kits are compatible with each Local Run Manager software analysis module.

View Compatible Kits
Result count:  11

Systems
Version
Available Analysis Modules
TruSight Tumor 15 Analysis Module
TruSight Tumor 15 Analysis Module

Analyzes and generates a filtered report for samples prepared using the TruSightTumor 15 assay for 15 genes associated with solid tumors.

View sample data
Small RNA Analysis Module
Small RNA Analysis Module

Aligns reads and outputs hits. Performs optional novel precursor discovery and pairwise differential expression analysis.

View sample data
RNA Fusion Analysis Module
RNA Fusion Analysis Module

Aligns reads and detects fusions for RNA libraries prepared with the TruSight RNA Fusion Panel kit.

View sample data
Resequencing Analysis Module
Resequencing Analysis Module

Aligns reads and performs variant analysis for whole-genome sequencing of small genomes.

View sample data
DNA Enrichment Analysis Module
DNA Enrichment Analysis Module

Aligns reads against a whole genome reference and performs variant analysis for specified regions of interest.

View sample data
RNA Amplicon Analysis Module
RNA Amplicon Analysis Module

Enables streamlined differential expression analysis of AmpliSeq for Illumina RNA targeted panels sequenced on Illumina sequencing systems.

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Targeted RNA Module
Targeted RNA Module

Enables streamlined differential expression analysis of TruSeq Targeted RNA panels sequenced on Illumina sequencing systems.

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GenerateFASTQ Analysis Module
GenerateFASTQ Analysis Module

Generates demultiplexed FASTQ files for further downstream analysis.

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DNA Amplicon Analysis Module
DNA Amplicon Analysis Module

Enables streamlined variant detection of AmpliSeq for Illumina DNA and TruSeq Amplicon panels sequenced on Illumina sequencing systems.

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Amplicon Module
Amplicon Module

Enables streamlined variant detection of TruSeq Amplicon panels sequenced on Illumina sequencing systems.

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Amplicon DS Analysis Module
Amplicon DS Analysis Module

Enables streamlined analysis of the Illumina TruSight Tumor 26 and dual pool (dual strand) TruSeq Custom Amplicon panels.

View sample data

Technical Support Bulletins

Technical support bulletins contain details about common procedures and answers to frequently asked questions. See the following bulletins for more information about using Local Run Manager.

Download Analysis Modules or Get Support

Download a specific analysis software module of interest, or access Local Run Manager technical support information.

Download Local Run Manager Modules
Access Local Run Manager Support