Intuitive software, deeper biological insights
A powerful and scalable analysis environment for interpreting and visualizing multiomic data
Your email address is never shared with third parties.
Illumina Connected Multiomics is the first fully integrated multiomic and multimodal analysis software from Illumina, enabling seamless sample-to-insights workflows. Researchers can explore multiomic data, reveal deeper biological insights, and accelerate discoveries.
With intuitive, scalable analysis, biologists can generate powerful statistics and interactive visualizations—no bioinformatics background required. Bioinformaticians can focus on meaningful collaborations instead of routine tasks. This comprehensive platform also replaces the need for complex open-source tools, streamlining data analysis and maintenance.
Illumina Connected Multiomics integrates single-cell, spatial transcriptomics, proteomics, methylation data and more. It’s optimized for Illumina multiomic library prep kits and offers support for additional kits.
Interactive visualizations and powerful statistics enable researchers to reveal insights from large, complex datasets and get publication-ready figures.
Preconfigured and customizable analysis options, offering end-to-end sample to insights workflows, including direct integration of outputs from DRAGEN secondary analysis.
Power single-cell, spatial transcriptomics, proteomics, methylations and more with robust infrastructure for multiomic and multimodal studies.
Filter samples, perform dimension reduction, cluster analysis, correlation and similarity analysis, identify differential protein expression, biological interpretation with pathway analysis, and more.
Optimized for the Illumina Single Cell 3' RNA Prep Kit, Illumina Connected Multiomics performs cell classification, data visualization, and biological interpretation.
Analyze and visualize spacial transcript data, easily view spatial data overlaid on tissue images, quickly filter and/or make selection in real time, and perform additional tertiary analysis, such as differential expression, marker gene identification, and cell typing.
Annotate genomic regions, identify differentially methylated regions, explore biological groupings with unsupervised clustering, and capture pathways associated with methylation changes.
Illumina introduces a revolutionary next-generation sequencing (NGS) and multiomics technology—engineered to deliver deeper insights, accelerate discovery, and push the boundaries of what’s possible in genomics.
Library prep for multiomic workflows extracts, quantifies, and prepares DNA, RNA, and proteins from a single sample for sequencing. Optimized protocols generate sequencing-ready libraries while maintaining data integrity and cross-platform compatibility.
Illumina Single Cell 3' RNA Prep
Accessible and highly scalable single-cell RNA-Seq solution for mRNA capture, barcoding, and library prep with a simple manual workflow that doesn't require a cell isolation instrument.
Illumina Protein Prep enables discovery and quantification of human proteins across more than 200 biological pathways using a SOMAmer-based proteomics assay with an NGS readout.
Production-Scale Sequencers
Access multiple omics on a single instrument. Deep and broad coverage through advanced applications for a comprehensive view of omic data with the NovaSeq X Series and NovaSeq 6000 Sequencing System.
Benchtop Sequencers
Flexible, affordable, and scalable to help both new and experienced users achieve fast turnaround times and reduced operating costs with NextSeq 1000 and NextSeq 2000 Sequencing Systems.
Illumina Connected Multiomics
A powerful cloud-based multiomic analysis and interpretation software, enabling sample to insight workflow with interactive visualizations, infrastructure scalability, and secure data management.
Accurate, comprehensive, and efficient secondary analysis of next-generation sequencing data. Optimized secondary analysis pipelines supporting Illumina multiomic library prep and Illumina Connected Multiomics.
A secure genomic data platform to operationalize informatics and drive scientific insights.
Correlation Engine is an interactive knowledge base where users can put their private multiomic data into biological context with highly curated public multiomic data.
Partek Flow provides an on-premises stand-alone tertiary multiomic analysis option and supports a variety of commercial assays.
Powerful, intuitive, scalable multiomic analysis
Illumina Connected Multiomics simplifies large-scale biological data analysis through an intuitive interface, making analysis accessible no matter your skill level. In this flyer, you will learn how it streamlines the entire workflow from sample prep to data interpretation, delivering powerful insights all within the Illumina ecosystem.
Scale your single-cell research with intuitive multiomic analysis
This flyer outlines how Illumina Connected Multiomics enables researchers of all skill levels to intuitively analyze large and complex single-cell data at scale and combine with other omic data and modalities for new discoveries.
Accurate spatial exploration at scale
Learn about the full potential of spatial transcriptomics with Illumina Connected Multiomics in this flyer. From sample prep to interactive, publication-ready visualizations, intuitively explore cellular processes and spatial expression patterns with accuracy and scale.
Learn how Illumina Connected Multiomics streamlines proteomics research, from data analysis to biological insights. This flyer explores how this cloud-based software can simplify workflows, perform powerful multiomic analysis, and scale your studies with ease.
Intuitive and powerful methylation analysis
This flyer explores the intuitive analyze of complex gene regulation data with seamless integration of 5-base methylation and multiomic data, and interactive visualization tools that streamline your journey from sample preparation to biological insight.
Illumina Connected Multiomics user documentation
View setup and navigation instructions, learn about study and analysis features, and access additional software documentation.
Unlocking deeper biological insights with Illumina Connected Multiomics
Kevin Moore, VP of Software Product Management at Illumina, explores how Illumina Connected Multiomics streamlines data integration, visualization, and interpretation—enhancing efficiency and accelerating discovery.
AI-powered mutiomics: Joachim Schmid on data analysis at Illumina
In this episode, Theral Timpson dives into the burgeoning field of multiomics and its massive data challenges with a veteran of digital pathology, Joachim Schmid.
Multiomics multiplies your discovery power
See how you can use multiomics to better connect genotype to phenotype and obtain a full cellular readout not found through single omics approaches.
Your email address is never shared with third parties.
We’d love to share more platform features, show the easy-to-use interface, and answer any questions you may have.