NovaSeq 6000Dx Applications & Methods

NovaSeq 6000Dx Instrument Applications

Dual modes of operation enable both IVD testing and clinical research, opening new possibilities across a range of sample types, sequencing methods, and applications.

Key Diagnostic Application: Target Enrichment

Illumina DNA Prep with Enrichment Dx is a fast, integrated workflow for a wide range of applications. It supports a broad DNA input range and multiple sample types including blood, genomic DNA, and formalin-fixed, paraffin-embedded (FFPE) tissue.

three to five hours
Prep
Illumina DNA Prep with Enrichment Dx

This IVD-compliant solution enables clinical laboratories to add targeted enrichment panels to their menu of diagnostic applications.

less than or equal to 44 hours
Sequence
NovaSeq 6000Dx Reagent Kits

Reagents for the NovaSeq 6000Dx provide IVD-compliant, ready-to-use cartridge-based reagents for cluster generation and SBS.

less than 25 minutes
Analyze
DRAGEN for Illumina DNA Prep with Enrichment Dx for NovaSeq 6000Dx

The DRAGEN server features an integrated FPGA chip for accurate, ultrarapid NGS secondary data analysis with DRAGEN for NovaSeq 6000Dx and a dedicated analysis module for Illumina DNA Prep with Enrichment Dx.

Key Clinical Research Applications (in Research Mode)

three to five hours
Prep
Illumina DNA PCR-Free Prep

A high-performing, fast, and integrated workflow for sensitive applications such as human whole-genome sequencing.

less than or equal to 44 hours
Sequence
NovaSeq 6000 Reagent Kits

Reagent kits for the NovaSeq 6000 provide ready-to-use cartridge-based reagents for cluster generation and SBS. NovaSeq 6000Dx is compatible with RUO reagent kits.

less than 25 minutes
Analyze
BaseSpace Sequence Hub or stand-alone DRAGEN server

Leverage DRAGEN Germline or DRAGEN Somatic on Illumina BaseSpace Sequence Hub, or stand-alone DRAGEN server (purchased separately) for accurate, comprehensive, and efficient secondary analysis.

six hours
Prep
Illumina DNA Prep with Enrichment

A fast, integrated workflow for a wide range of applications providing targeted resequencing for custom panels, fixed panels, and whole-exome enrichment.

Illumina DNA Prep with Exome 2.0 Plus Enrichment

A high-performance, fast, and complete whole-exome sequencing kit.

about twenty-five hours
Sequence
NovaSeq 6000 Reagent Kits

Reagent kits for the NovaSeq 6000 provide ready-to-use cartridge-based reagents for cluster generation and SBS. NovaSeq 6000Dx is compatible with RUO reagent kits.

less than eight minutes
Analyze
Paired DRAGEN server for NovaSeq 6000Dx

Leverage the Illumina DRAGEN for Illumina DNA Prep with Enrichment (IDPE) App in RUO mode for accurate and efficient secondary analysis.

about seven hours
Prep
TruSight Oncology 500 High-Throughput (HT)

TruSight Oncology 500 HT enables in-house comprehensive genomic profiling of tumor samples with flexibility for higher sample throughput and batching options. DNA & RNA content targets 523 genes for assessment of all DNA and RNA variant types, plus TMB and MSI. Automation kits and methods are available for reduced hands-on time and scalability.

about twenty-five hours
Sequence
NovaSeq 6000 Reagent Kits

Flexible sample batching allows for 16-192 samples per sequencing flow cell on the NovaSeq 6000Dx system, in RUO manual mode. Reagent kits for the NovaSeq 6000 provide ready-to-use cartridge-based reagents for cluster generation and SBS. NovaSeq 6000Dx is compatible with RUO reagent kits.

less than fifteen minutes
Analyze
Stand-alone DRAGEN server or Illumina Connected Analytics (ICA)

Rapid variant calling algorithm powered by DRAGEN pipelines, available locally with separate, stand-alone DRAGEN server. Secure, scalable, cloud-based variant calling is also available with DRAGEN pipelines on Illumina Connected Analytics (ICA), featuring auto-launch capability.