Partek Flow software

User-friendly bioinformatics software for the analysis and visualization of multiomic data

Overview

Partek Flow software enables the visual analysis of next-generation sequencing and large-scale multiomic data. An intuitive interface, robust statistical algorithms, and information-rich visualizations empower researchers of all skill levels to analyze their data with confidence. 

 

Easily explore bulk RNA-Seq, single-cell, spatial transcriptomics, ChIP-Seq and ATAC-Seq, DNA-Seq, metagenomics, and microarray data. Compatibility with scalable DRAGEN secondary analysis and flexible installation options accommodate the needs of individual users, core laboratories, and large enterprise organizations.

Key features

Intuitive

Analyze multiomic data sets with easy-to-use tools—no advanced bioinformatics skills needed

Powerful statistics

Attain results you can trust with industry-standard statistical methods

Interactive visualizations

Explore data with information rich and publication-ready visualizations

Specifications

Applications

Dig deeper into RNA-Seq data to gain a comprehensive picture of gene expression by identifying differential expression, alternative splicing, gene fusions, and more 

Unlock biological insights from single-cell studies, including single-cell RNA-Seq, ATAC-Seq, CITE-Seq, antibody–capture sequencing, flow cytometry, mass cytometry, and more to understand cellular function at high-resolution

Process and analyze ATAC-Seq/ChIP-Seq data easily in a user-friendly, context-sensitive interface to uncover alterations in chromatin accessibility and gene regulation across the genome

Explore transcriptional activity in intact tissues to link gene expression to structure and functional activity by analyzing and integrating spatially-resolved single-cell RNA-Seq, CITE-Seq, antibody–capture sequencing, and more

Metagenomics

Evaluate bacterial diversity and detect microbial abundance in various environments to gain insight into microbial biodiversity and function with powerful, easy-to-use analysis tools for microbial characterization

Microarray

Investigate disease mechanisms and regulation. Supporting Illumina genotyping and methylation arrays and Affymetrix gene expression

DNA-Seq

Identify genetic variants that contribute to disease and phenotypes within WGS and WES data

Pathway

Explore complex biological relationships and pathways between genes to discover meaningful biological insights

Example workflow

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Lab
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Run
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Analytics
4
Insights

Partek Flow software

User-friendly bioinformatics software for the analysis and visualization of multiomic data.

Related applications and methods

Plans and pricing

Annual and multi-year licenses are available for purchase. Chat with a specialist about pricing.

Subscription options

Feature Lab Edition Enterprise
RNA-Seq
 
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ChIP-Seq/ATAC-Seq
 
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DNA-Seq
 
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Metagenomics
 
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Microarray
 
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Single Cell and spatial anlaysis Add on Add on
Pathway anlaysis Add on Add on
Included data storage (additional storage available for purchase) 1 TB (Illumina hosted) 1 TB (Illumina hosted)
Illumina hosted
 
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Customer hosted
 
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Registered users One per seat Unlimited
Concurrent users No Based on number of seats in purchase (i.e. 1 for a single seat license)
Administrative account No
 
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User data partition No
 
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Project collaboration features No
 
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Task queue control No
 
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Documentation

Product literature
Support documentation

A dedicated support section is not currently available for this product

If you have questions, please reach out to our technical support team.

Figures

Build powerful analysis workflows within an easy-to-use visual interface

Visually build analysis workflows that you can save and reuse later or share with colleagues. The context-sensitive interface presents the right options at the right time so that you are never lost.

Speed up discovery with interactive visualizations

Explore and interact with your omics data in real time using information rich visualizations powered by industry-standard statistical algorithms. Save your analysis and collaborate with colleagues anywhere in the world. When ready, export in publication-ready formats.

Analyze multiple omics data types or modalities together

Combine multiple types of molecular information within individual cells to gain a deeper and more comprehensive understanding of cellular behavior and function.

Resources

In this on-demand webinar, we explore in situ gene and protein expression in tonsil tissues to gather meaningful and applicable results. You will gain insights into spatial multiomics analysis and practical applications for your research studies using Partek Flow.

In this on-demand webinar, an expert panel outlines the essential concepts and benefits of single-cell analysis and why scientists should consider it for their research. They illuminate the analytical process and discuss strategies to overcome common analysis challenges.

This on-demand webinar demonstrates the Partek Flow data viewer, which features visualizations with intuitive settings and functionality. Watch and learn strategies to increase your productivity.

Partek Flow Lab Edition (Illumina Hosted)

20130166

Provides small labs and departments with the tools to store, manage, and analyze large genomic data sets. Installed on the Illumina cloud and includes one named user license, 1 TB of data storage, and tools for bulk RNA-Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics applications. Additional add-on tools can be purchased.

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Partek Flow Lab Edition (Customer Hosted)

20130164

Provides small labs and departments with the tools to store, manage, and analyze large genomic data sets. Installed on customer cloud or server and includes one named user license, tools for bulk RNA-Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics applications. Additional add-on tools can be purchased.

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Partek Flow Enterprise Edition (Illumina Hosted)

20130167

Partek Flow Enterprise is for large labs, departments, or organizations with many users and diverse needs. Installed on the Illumina cloud and includes unlimited user accounts with simultaneous usage limited to the number of seats purchased, 1 TB of data storage, data and user management administration, and tools for bulk RNA- Seq, DNA-Seq, ChIP- Seq/ATAC-Seq, microarray, and metagenomics applications. Additional seats, add-on tools, and storage can be purchased.

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Partek Flow Enterprise Edition (Customer Hosted)

20130165

Partek Flow Enterprise is for large labs, departments, or organizations with many users and diverse needs. Installed on a customer cloud or server and includes unlimited user accounts with simultaneous usage limited to the number of seats purchased, 1 TB of data storage, data and user management administration, and tools for bulk RNA- Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics applications. Additional seats, tools, and storage can be purchased.

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Add-on content (9)

Partek Flow Lab Edition Add On - Pathway (Customer Hosted)

20130172

Add-on tool to Partek Flow Lab Edition for pathway enrichment analysis.

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Partek Flow Lab Edition Add On - Pathway (Illumina Hosted)

20130174

Add-on tool to Partek Flow Lab Edition for pathway enrichment analysis.

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Partek Flow Lab Edition Add On - Single Cell and Spatial (Customer Hosted)

20130176

Add-on tool to Partek Flow Lab Edition for tertiary analysis of single cell and spatial data.

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Partek Flow Lab Edition Add On - Single Cell and Spatial (Illumina Hosted)

20130178

Add-on tool to Partek Flow Lab Edition for tertiary analysis of single cell and spatial data.

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Partek Flow Enterprise Edition Add On - Pathway (Customer Hosted)

20130173

An add-on tool to Partek Flow Enterprise Edition for pathway enrichment analysis. Seats purchased must match the number of Partek Flow seats purchased.

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Partek Flow Enterprise Edition Add On - Pathway (Illumina Hosted)

20130175

An add-on tool to Partek Flow Enterprise Edition for pathway enrichment analysis. Seats purchased must match the number of Partek Flow seats purchased.

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Partek Flow Enterprise Edition Add On - Single Cell and Spatial (Customer Hosted)

20130177

Add-on tool to Partek Flow Enterprise Edition for tertiary analysis of single cell and spatial data. Seats purchased must match the number of Partek Flow seats purchased.

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Partek Flow Enterprise Edition Add On - Single Cell and Spatial (Illumina Hosted)

20130179

Add-on tool to Partek Flow Enterprise Edition for tertiary analysis of single cell and spatial data. Seats purchased must match the number of Partek Flow seats purchased.

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Partek Flow Add On - 1TB Additional Data Storage

20130187

An add-on enabling an additional 1TB of data storage for Partek Flow Illumina-Hosted software.

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Selection summary

Product

Qty

Unit Price

FAQs

Bulk RNA-Seq, single-cell analysis, spatial transcriptomics, ChIP-Seq and ATAC-Seq, DNA-Seq, metagenomics, microarray, and pathway analysis

Bulk and single-cell NGS, spatial analysis, microarray, and flow cytometry

Partek Flow software offers many ways to interact with and present your data. Available options include: PCA, t-SNE, UMAP, volcano plots, heatmaps, bubble maps, Venn diagrams, dot plots, KEGG pathways, Sankey plots, histograms, TSS plots, pie charts, cell trajectory graphs, knee plots, scatter plots (2D or 3D), bar charts, tissue spot histology images, violin plots, and box-whisker plots.

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Speak with a specialist

Reach out for information about our products and services, or get answers to questions about our technology.