Partek Flow software

User-friendly bioinformatics software for the analysis and visualization of multiomic data

Overview

Partek Flow software enables the visual analysis of next-generation sequencing and large-scale multiomic data. An intuitive interface, robust statistical algorithms, and information-rich visualizations empower researchers of all skill levels to analyze their data with confidence. 

 

Easily explore bulk RNA-Seq, single-cell, spatial transcriptomics, ChIP-Seq and ATAC-Seq, DNA-Seq, metagenomics, and microarray data. Compatibility with scalable DRAGEN secondary analysis and flexible installation options accommodate the needs of individual users, core laboratories, and large enterprise organizations.

Key features

Intuitive

Analyze multiomic data sets with easy-to-use tools—no advanced bioinformatics skills needed

Powerful statistics

Attain results you can trust with industry-standard statistical methods

Interactive visualizations

Explore data with information rich and publication-ready visualizations

Specifications

Applications

Dig deeper into RNA-Seq data to gain a comprehensive picture of gene expression by identifying differential expression, alternative splicing, gene fusions, and more 

Unlock biological insights from single-cell studies, including single-cell RNA-Seq, ATAC-Seq, CITE-Seq, antibody–capture sequencing, flow cytometry, mass cytometry, and more to understand cellular function at high-resolution

Process and analyze ATAC-Seq/ChIP-Seq data easily in a user-friendly, context-sensitive interface to uncover alterations in chromatin accessibility and gene regulation across the genome

Explore transcriptional activity in intact tissues to link gene expression to structure and functional activity by analyzing and integrating spatially-resolved single-cell RNA-Seq, CITE-Seq, antibody–capture sequencing, and more

Metagenomics

Evaluate bacterial diversity and detect microbial abundance in various environments to gain insight into microbial biodiversity and function with powerful, easy-to-use analysis tools for microbial characterization

Microarray

Investigate disease mechanisms and regulation. Supporting Illumina genotyping and methylation arrays and Affymetrix gene expression

DNA-Seq

Identify genetic variants that contribute to disease and phenotypes within WGS and WES data

Pathway

Explore complex biological relationships and pathways between genes to discover meaningful biological insights

Example workflow

1
Lab
2
Run
3
Analytics
4
Insights

Partek Flow software

User-friendly bioinformatics software for the analysis and visualization of multiomic data.

Related applications and methods

Plans and pricing

Annual and multi-year licenses are available for purchase. Chat with a specialist for pricing.

Subscription options

Feature Lab Edition Enterprise
RNA-Seq
 
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ChIP-Seq/ATAC-Seq
 
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DNA-Seq
 
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Metagenomics
 
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Microarray
 
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Single Cell and spatial anlaysis Add on Add on
Pathway anlaysis Add on Add on
Included data storage (additional storage available for purchase) 1 TB (Illumina hosted) 1 TB (Illumina hosted)
Illumina hosted
 
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Customer hosted
 
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Registered users One per seat Unlimited
Concurrent users No Based on number of seats in purchase (i.e. 1 for a single seat license)
Administrative account No
 
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User data partition No
 
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Project collaboration features No
 
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Task queue control No
 
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Documentation

Product literature
Support documentation

A dedicated support section is not currently available for this product

If you have questions, please reach out to our technical support team.

Figures

Build powerful analysis workflows within an easy-to-use visual interface

Visually build analysis workflows that you can save and reuse later or share with colleagues. The context-sensitive interface presents the right options at the right time so that you are never lost.

Speed up discovery with interactive visualizations

Explore and interact with your omics data in real time using information rich visualizations powered by industry-standard statistical algorithms. Save your analysis and collaborate with colleagues anywhere in the world. When ready, export in publication-ready formats.

Analyze multiple omics data types or modalities together

Combine multiple types of molecular information within individual cells to gain a deeper and more comprehensive understanding of cellular behavior and function.

Resources

In this on-demand webinar, we explore in situ gene and protein expression in tonsil tissues to gather meaningful and applicable results. You will gain insights into spatial multiomics analysis and practical applications for your research studies using Partek Flow.

In this on-demand webinar, an expert panel outlines the essential concepts and benefits of single-cell analysis and why scientists should consider it for their research. They illuminate the analytical process and discuss strategies to overcome common analysis challenges.

This on-demand webinar demonstrates the Partek Flow data viewer, which features visualizations with intuitive settings and functionality. Watch and learn strategies to increase your productivity.

Partek Flow Lab Edition (Illumina Hosted) - One seat

20130166

Partek Flow Lab Edition provides small labs and departments with the tools to store, manage, and analyze large genomic data sets. It includes statistical tools, interactive visualization capabilities, and 1 TB of data storage. Includes bulk RNA-Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics tools. Comes with a single, named user license. Additional user licenses and tools can be purchased.

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Partek Flow Lab Edition (Customer Hosted) - One seat

20130164

Partek Flow Lab Edition provides small labs and departments with the tools to store, manage, and analyze large genomic data sets. It includes statistical tools, interactive visualization capabilities, and 1 TB of data storage. Includes bulk RNA-Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics tools. Comes with a single, named user license. Additional user licenses and tools can be purchased.

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Partek Flow Enterprise Edition (Illumina Hosted) - One seat

20130167

Partek Flow Enterprise is for large labs, departments, or organizations with many users and diverse needs. It includes unlimited user accounts, data and user management settings, statistical tools, interactive visualization capabilities, and 1 TB of data storage. Includes bulk RNA- Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics tools. Additional tools can be purchased. Simultaneous usage is limited by the number of licenses purchased.

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Partek Flow Enterprise Edition (Customer Hosted) - One seat

20130165

Partek Flow Enterprise is for large labs, departments, or organizations with many users and diverse needs. It includes unlimited user accounts, data and user management settings, statistical tools, interactive visualization capabilities, and 1 TB of data storage. Includes bulk RNA- Seq, DNA-Seq, ChIP-Seq/ATAC-Seq, microarray, and metagenomics tools. Additional tools can be purchased. Simultaneous usage is limited by the number of licenses purchased.

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Add-on content (9)

Partek Flow Lab Edition Add on - Pathway (Customer Hosted) - One seat

20130172

An add-on module to Partek Flow Lab Edition (Customer-hosted, one registered user per seat) providing pathway enrichment analysis. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Lab Edition Add on - Pathway (Illumina Hosted) - One seat

20130174

An add-on module to Partek Flow Lab Edition (Illumina-hosted, one registerd user per seat) providing pathway enrichment analysis. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Lab Edition Add on - Single Cell and Spatial (Customer Hosted) - One seat

20130176

An add-on module to Partek Flow Lab Edition (Customer-hosted, one registered user per seat) supporting tertiary analysis of single cell data. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Lab Edition Add on - Single Cell and Spatial (Illumina Hosted) - One seat

20130178

An add-on module to Partek Flow Lab Edition (Illumina-hosted, one registered user per seat) supporting tertiary analysis of single cell data. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Enterprise Edition Add on - Pathway (Customer Hosted) - One seat

20130173

An add-on module to Partek Flow Enterprise Edition (Customer-hosted, one concurrent seat) providing pathway enrichment analysis. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Enterprise Edition Add on - Pathway (Illumina Hosted) - One seat

20130175

An add-on module to Partek Flow Enterprise Edition (Illumina-hosted, one concurrent seat) providing pathway enrichment analysis. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Enterprise Edition Add on - Single Cell and Spatial (Customer Hosted) - One seat

20130177

An add-on module to Partek Flow Enterprise Edition (Customer-hosted, one concurrent seat) supporting tertiary analysis of single cell data. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Enterprise Edition Add on – Single Cell and Spatial (Illumina Hosted) - One seat

20130179

An add-on module to Partek Flow Enterprise Edition (Illumina-hosted, one concurrent seat) supporting tertiary analysis of single cell data. The number of add-on toolkit seats included should match number of Partek Flow seats.

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Partek Flow Add on – 1TB Additional Data Storage (Illumina Hosted)

20130187

An add-on enabling an additional 1TB of data storage for Partek Flow Illumina-Hosted software

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Selection summary

Product

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FAQs

Bulk RNA-Seq, single-cell analysis, spatial transcriptomics, ChIP-Seq and ATAC-Seq, DNA-Seq, metagenomics, microarray, and pathway analysis

Bulk and single-cell NGS, spatial analysis, microarray, and flow cytometry

Partek Flow software offers many ways to interact with and present your data. Available options include: PCA, t-SNE, UMAP, volcano plots, heatmaps, bubble maps, Venn diagrams, dot plots, KEGG pathways, Sankey plots, histograms, TSS plots, pie charts, cell trajectory graphs, knee plots, scatter plots (2D or 3D), bar charts, tissue spot histology images, violin plots, and box-whisker plots.

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Speak with a specialist

Reach out for information about our products and services, or get answers to questions about our technology.