MiSeq products offer rapid, cost-effective sequencing with an easy workflow

Library preparation kits and sequencing reagents, automation, and software solutions

MiSeq Products and Services

MiSeq Reagent Kits v3
MiSeq Reagent Kits v3

MiSeq Reagent Kits v3 offer enhanced chemistry to increase cluster density and read length, and improve sequencing quality scores, compared to earlier kit versions. The v3 chemistry enables up to 15 Gb of output with 25 M sequencing reads and 2x300 bp read lengths.

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MiSeq Reagent Kits v2
MiSeq Reagent Kits v2

MiSeq sequencing reagents in pre-filled, ready-to-use cartridges. Micro and nano formats are available for low output applications.

TruSight Tumor 15
TruSight Tumor 15

Focused sequencing panel to assess 15 genes that are commonly mutated in solid tumors in a single assay, with a simple, rapid workflow.

TruSeq Targeted RNA Expression Library Prep Kits
TruSeq Targeted RNA Expression Library Prep Kits

Targeted RNA assays for gene expression studies: fixed or custom sequencing panels, with a simple workflow and automated data analysis.

TruSeq Custom Amplicon Low Input Kit
TruSeq Custom Amplicon Low Input Kit

This library prep kit delivers sensitive and specific amplicon sequencing results from both low-input and FFPE DNA samples.

Nextera XT DNA Library Preparation Kit
Nextera XT DNA Library Preparation Kit

Prepare sequencing libraries for small genomes, PCR amplicons, plasmids, or cDNA in less than 90 minutes, with a low DNA input requirement.

TruSeq Amplicon - Cancer Panel
TruSeq Amplicon - Cancer Panel

The TruSeq Amplicon - Cancer Panel is a highly multiplexed targeted resequencing assay for detecting somatic mutations.


High Throughput Library Prep Automation

Illumina offers high throughput-compatible library prep kits and partnerships with automation vendors.

BaseSpace Clarity LIMS

Our laboratory information management system (LIMS) helps genomics laboratories track samples and optimize procedures and workflows.

MiSeq Reporter
MiSeq Reporter

MiSeq Reporter is a pre-installed software tool that performs secondary data analysis after a MiSeq System sequencing run.

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DesignStudio Custom Assay Design Tool

DesignStudio is a web-based assay design tool to help researchers design and order custom sequencing probes, or create custom genotyping assays.

Illumina Experiment Manager

Illumina Experiment Manager guides the creation and setup of your sample sheet. Built-in validation checks to minimize sample sheet setup errors.

BaseSpace Sequence Hub

Next-generation sequencing (NGS) data analysis, storage, and collaboration made easy. Welcome to push-button informatics.

BaseSpace Cohort Analyzer

Incorporate proprietary molecular or phenotypic data from individual subjects, clinical trial cohorts, or studies in cell lines and model organisms.

BaseSpace Correlation Engine

Web-based tools that support early-stage and translational discovery to identify mechanisms of disease, drug targets, prognostic or predictive biomarkers.

BaseSpace Variant Interpreter (Beta)

A user-friendly, scalable, and secure cloud-based platform to help determine biological significance of genomic variants, and create reports.


Comprehensive Scientific Support

Illumina services and support begins when the MiSeq Series is delivered. Illumina scientists and engineers assist with NGS system installation and setup and train laboratory personnel. In addition to onsite support, training courses are available to bring laboratory personnel quickly up to speed.

Illumina scientists are available 24/7 globally to answer questions every step of the way, enabling researchers to focus on making the next breakthrough discovery.


Illumina Product Care

In addition to the 1-year basic service warranty included with system purchase, Illumina offers maintenance, repair, and qualification solutions.

Illumina University

Get high-quality results on Illumina technology even faster with instructor-led, hands-on courses and web-based training options.

Illumina Consulting

Illumina provides consulting services that connect an experienced Illumina team direct to the laboratory to jump-start successful sequencing workflow implementation.